Bishop-Laboratory/RLSeq: RLSeq: An analysis package for R-loop mapping data

RLSeq is a toolkit for analyzing and evaluating R-loop mapping datasets. RLSeq serves two primary purposes: (1) to facilitate the evaluation of dataset quality, and (2) to enable R-loop analysis in the context of publicly-available data sets from RLBase. The package is intended to provide a simple pipeline, called with the `RLSeq()` function, which performs all main analyses. Individual functions are also accessible and provide custom analysis capabilities. Finally an HTML report is generated with `report()`.

Getting started

Package details

Bioconductor views Classification Coverage Epigenetics Sequencing Transcriptomics
LicenseMIT + file LICENSE
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
Bishop-Laboratory/RLSeq documentation built on Jan. 28, 2023, 11:38 p.m.