rlsampleTxOl: RLBase Sample Transcript Feature Overlaps

In Bishop-Laboratory/RLSeq: RLSeq: An analysis package for R-loop mapping data

RLBase Sample Transcript Feature Overlaps

Description

Summary statistics from transcript feature overlap analysis of peaks from all RLBase samples.

Usage

rlsampleTxOl

Format

An object of class tbl_df (inherits from tbl, data.frame) with 4754 rows and 4 columns.

Details

Structure

rlsampleTxOl is a tbl with the following columns:

• rlsample

  • The RLBase sample identifier for the sample.

  • Matches the rlsample column in RLHub::rlbase_samples

• feature

  • The transcript feature for which overlap analysis was performed.

  • These features were derived from the Transcript Features collection described in RLHub::annotations

• n

  • The raw number of peaks from the sample overlapping a feature.

• pct

  • The proportion of peaks fro the sample overlapping a feature.

Examples

rlsampleTxOl

Bishop-Laboratory/RLSeq documentation built on Jan. 28, 2023, 11:38 p.m.