corrHeatmap: Plot Correlation Results

In Bishop-Laboratory/RLSeq: RLSeq: An analysis package for R-loop mapping data

Plot Correlation Results

Description

Plots a heatmap to visualize the pairwise Pearson correlation matrix generated via corrAnalyze.

Usage

corrHeatmap(object, returnData = FALSE, complex = TRUE, ...)

Arguments

object	An RLRanges with corrAnalyze already run.
returnData	If TRUE, plot data is returned instead of plotting. Default: FALSE
complex	If TRUE, ComplexHeatmap::Heatmap will be used for plotting. Otherwise, pheatmap::pheatmap is used. Default: TRUE
...	For internal use.

Value

A plot object or plotting data (if returnData is TRUE).

Examples

# Example RLRanges data with corrAnalyze() already run.
rlr <- readRDS(system.file("extdata", "rlrsmall.rds", package = "RLSeq"))

# Corr heatmap
corrHeatmap(rlr)

Bishop-Laboratory/RLSeq documentation built on Jan. 28, 2023, 11:38 p.m.