YinanZheng/REMP: Repetitive Element Methylation Prediction

Machine learning-based tools to predict DNA methylation of locus-specific repetitive elements (RE) by learning surrounding genetic and epigenetic information. These tools provide genomewide and single-base resolution of DNA methylation prediction on RE that are difficult to measure using array-based or sequencing-based platforms, which enables epigenome-wide association study (EWAS) and differentially methylated region (DMR) analysis on RE.

Getting started

Package details

Bioconductor views DNAMethylation DataImport DifferentialMethylation Epigenetics GenomeWideAssociation MethylationArray Microarray MultiChannel Preprocessing QualityControl Sequencing TwoChannel
URL https://github.com/YinanZheng/REMP
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
YinanZheng/REMP documentation built on May 14, 2022, 5:58 p.m.