selinj/chromswitch: An R package to detect chromatin state switches from epigenomic data
Version 1.1.0

Chromswitch implements a flexible method to detect chromatin state switches between samples in two biological conditions in a specific genomic region of interest given peaks or chromatin state calls from ChIP-seq data.

Getting started

Package details

Bioconductor views Clustering DifferentialPeakCalling Epigenetics FunctionalGenomics GeneExpression HistoneModification MultipleComparison Transcription
Maintainer
LicenseMIT + file LICENSE
Version1.1.0
URL https://github.com/sjessa/chromswitch
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("selinj/chromswitch")
selinj/chromswitch documentation built on Dec. 25, 2017, 7:52 a.m.