This package provides a pipeline to analyze single-nucleotide resolution methylation data (Illumina 450k/EPIC methylation array, targeted BS-Seq, etc.). It provides differential methylation for CpG Sites, differential methylation for CpG Islands, integration with gene expression data, with visualizaton options. Discussion Group: https://sourceforge.net/p/cohcap/discussion/bioconductor/
|Author||Charles Warden <[email protected]>, Yate-Ching Yuan <[email protected]>, Xiwei Wu <[email protected]>|
|Bioconductor views||DNAMethylation DifferentialMethylation Epigenetics MethylSeq Microarray|
|Maintainer||Charles Warden <[email protected]>|
|Package repository||View on Bioconductor|
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