API for COHCAP
CpG Island Analysis Pipeline for Illumina Methylation Array and Targeted BS-Seq Data

Global functions
COHCAP.BSSeq.preprocess Man page
COHCAP.BSSeq_V2.methyl.table Man page Source code
COHCAP.annotate Man page
COHCAP.avg.by.island Man page
COHCAP.avg.by.site Man page
COHCAP.denovo Man page
COHCAP.integrate.avg.by.island Man page
COHCAP.integrate.avg.by.site Man page
COHCAP.qc Man page
COHCAP.reformatFinalReport Man page
COHCAP.site Man page
`COHCAP.denovo` Source code
`COHCAP.reformatFinalReport` Source code
annova.2way.pvalue Source code Source code Source code
annova.pvalue Source code
anova.pvalue Source code Source code
colLab Source code
cor.dist Source code Source code
cor.test.est Source code
cor.test.pvalue Source code
count.observed Source code Source code
cpp.ANOVA.1way.wrapper Source code Source code
cpp.annova.2way.wrapper Source code Source code
cpp.lm.1var.wrapper Source code Source code
cpp.paired.ttest.wrapper Source code Source code
cpp.ttest.wrapper Source code Source code
custom.cor Source code Source code
custom.mean Source code Source code Source code
fastLm_wrapper Source code Source code
fastLm_wrapper2 Source code Source code
lm.pvalue Source code Source code
lm.pvalue2 Source code Source code
ttest2 Source code Source code
COHCAP documentation built on Nov. 8, 2020, 8:07 p.m.