cbaf: Automated functions for comparing various omic data from cbioportal.org

This package contains functions that allow analysing and comparing omic data across various cancers/cancer subgroups easily. So far, it is compatible with RNA-seq, microRNA-seq, microarray and methylation datasets that are stored on cbioportal.org.

Package details

AuthorArman Shahrisa [aut, cre, cph], Maryam Tahmasebi Birgani [aut]
Bioconductor views AssayDomain BiomedicalInformatics ComparativeGenomics DNAMethylation Epigenetics GeneExpression Genetics ResearchField Software Transcription Transcriptomics
MaintainerArman Shahrisa <shahrisa.arman@hotmail.com>
LicenseArtistic-2.0
Version1.10.1
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("cbaf")

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cbaf documentation built on May 8, 2020, 2:03 a.m.