A tool to measure reproducibility between genomic experiments that produce two-dimensional peaks (interactions between peaks), such as ChIA-PET, HiChIP, and HiC. idr2d is an extension of the original idr package, which is intended for (one-dimensional) ChIP-seq peaks.
|Author||Konstantin Krismer [aut, cre, cph] (<https://orcid.org/0000-0001-8994-3416>), David Gifford [ths, cph] (<https://orcid.org/0000-0003-1709-4034>)|
|Bioconductor views||Classification DNA3DStructure Epigenetics FunctionalGenomics GeneRegulation HiC PeakDetection|
|Maintainer||Konstantin Krismer <[email protected]>|
|License||MIT + file LICENSE|
|Package repository||View on Bioconductor|
Install the latest version of this package by entering the following in R:
Any scripts or data that you put into this service are public.
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.