chipseq: Example Genomic Peak Data Set
In idr2d: Irreproducible Discovery Rate for Genomic Interactions Data
Description
This object contains genomic peaks from two replicate ChIP-seq experiments.
Usage
1
Format
A list with two components, the data frames rep1_df and
rep2_df, which have the following four columns:
column 1: chr character; genomic location of peak -
chromosome (e.g., "chr3")
column 2: start integer; genomic location of peak -
start coordinate
column 3: end integer; genomic location of peak -
end coordinate
column 4: value numeric; heuristic used
to rank the peaks
idr2d documentation built on Nov. 8, 2020, 6:16 p.m.
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Description
This object contains genomic peaks from two replicate ChIP-seq experiments.
Usage
1 |
Format
A list with two components, the data frames rep1_df and
rep2_df, which have the following four columns:
| column 1: | chr | character; genomic location of peak -
chromosome (e.g., "chr3") |
| column 2: | start | integer; genomic location of peak - start coordinate |
| column 3: | end | integer; genomic location of peak - end coordinate |
| column 4: | value | numeric; heuristic used to rank the peaks |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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