Files in idr2d

Irreproducible Discovery Rate for Genomic Interactions Data

README.md

NEWS

NAMESPACE

DESCRIPTION

LICENSE

build/vignette.rds

data/chipseq.rda

data/hic.rda

data/chiapet.rda

R/auxiliary.R R/main.R R/visualization.R R/zzz.R R/hic.R R/data.R

vignettes/bibliography.bib

vignettes/idr2d.Rmd vignettes/idr1d.Rmd man/parse_juicer_matrix.Rd man/establish_overlap1d.Rd man/estimate_idr2d_hic.Rd man/calculate_midpoint_distance2d.Rd man/calculate_midpoint_distance1d.Rd man/draw_hic_contact_map.Rd man/chiapet.Rd man/hic.Rd man/draw_idr_distribution_histogram.Rd man/estimate_idr2d.Rd man/establish_bijection1d.Rd man/calculate_relative_overlap1d.Rd man/parse_hic_pro_matrix.Rd man/establish_bijection.Rd man/estimate_idr.Rd man/determine_anchor_overlap.Rd man/establish_bijection2d.Rd man/chipseq.Rd man/establish_overlap2d.Rd man/draw_rank_idr_scatterplot.Rd man/preprocess.Rd man/estimate_idr1d.Rd man/remove_nonstandard_chromosomes2d.Rd man/draw_value_idr_scatterplot.Rd man/remove_nonstandard_chromosomes1d.Rd man/calculate_relative_overlap2d.Rd tests/testthat.R tests/testthat/test-distances.R tests/testthat/test-visualization.R tests/testthat/test-hic.R tests/testthat/test-main.R tests/testthat/test-anchor-overlap.R

inst/CITATION

inst/doc/idr2d.html

inst/doc/idr2d.Rmd

inst/doc/idr1d.html

inst/doc/idr1d.R inst/doc/idr2d.R inst/doc/idr1d.Rmd

idr2d documentation built on Nov. 8, 2020, 6:16 p.m.