Biocview "DNA3DStructure"

js2264/cooleR

Analysing cool files in R with HiContacts

js2264/coolerr

Analysing cool files in R with HiContacts

sevenC

Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs

ibn-salem/sevenC

Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs

ibn-salem/chromloop

Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs

trytrytry1369/FitHiC

Confidence estimation for intra-chromosomal contact maps

RuyuTan/FitHiC

Confidence estimation for intra-chromosomal contact maps

a1kaul/FitHiC

Confidence estimation for intra-chromosomal contact maps

FitHiC

Confidence estimation for intra-chromosomal contact maps

mworkman13/HiCAGE

Hi-C Annotation and Graphics Ensemble

mervesa/HiCDCPlus

Hi-C Direct Caller Plus

TsuPeiChiu/DNAshapeR

High-throughput prediction of DNA shape features

DNAshapeR

High-throughput prediction of DNA shape features

jhammelman/spatzie

Identification of enriched motif pairs from chromatin interaction data

idr2d

Irreproducible Discovery Rate for Genomic Interactions Data

kkrismer/idr2d

Irreproducible Discovery Rate for Genomic Interactions Data

MACPET

Model based analysis for paired-end data

IoannisVardaxis/MACPET

Model based analysis for paired-end data