recountmethylation: Access and Analyze DNA Methylation Array Databases

Access cross-study compilations of DNA methylation array databases. Database files can be downloaded and accessed using provided functions. Background about database file types (HDF5 and HDF5-SummarizedExperiment), SummarizedExperiment classes, and examples for data handling, validation, and analyses, can be found in the package vignettes. Note the disclaimer on package load, and consult the main manuscript for further info.

Package details

AuthorSean K Maden [cre, aut] (<>), Reid F Thompson [aut] (<>), Kasper D Hansen [aut] (<>), Abhinav Nellore [aut] (<>)
Bioconductor views DNAMethylation Epigenetics ExperimentHub MethylationArray Microarray
MaintainerSean K Maden <>
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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recountmethylation documentation built on Nov. 8, 2020, 4:59 p.m.