Description Usage Arguments Value See Also Examples
Retrieve all available sample metadata in a dataset from an HDF5 database. Returns data in metadata dataset "dsn" contained in an h5 file located at path "dbn."
1 | data_mdpost(dbn = "remethdb2.h5", dsn = "mdpost")
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dbn |
Path to h5 HDF5 database file. |
dsn |
Name or group path to HDF5 dataset containing the sample metadata and learned annotations. |
data.frame of available sample metadata.
hread()
1 2 3 4 5 | path <- system.file("extdata", "h5test", package = "recountmethylation")
fn <- list.files(path)
dbpath <- file.path(path, fn)
mdp <- data_mdpost(dbn = dbpath, dsn = "mdpost")
dim(mdp) # [1] 2 19
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