MethylSig is a package for testing for differentially methylated cytosines (DMCs) or regions (DMRs) in whole-genome bisulfite sequencing (WGBS) or reduced representation bisulfite sequencing (RRBS) experiments. MethylSig uses a beta binomial model to test for significant differences between groups of samples. Several options exist for either site-specific or sliding window tests, and variance estimation.
|Author||Yongseok Park [aut], Raymond G. Cavalcante [aut, cre]|
|Bioconductor views||DNAMethylation DifferentialMethylation Epigenetics MethylSeq Regression|
|Maintainer||Raymond G. Cavalcante <firstname.lastname@example.org>|
|Package repository||View on Bioconductor|
Install the latest version of this package by entering the following in R:
Any scripts or data that you put into this service are public.
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.