chipenrich: Gene Set Enrichment For ChIP-seq Peak Data
Version 2.2.0

ChIP-Enrich performs gene set enrichment testing using peaks called from a ChIP-seq experiment. The method empirically corrects for confounding factors such as the length of genes, and the mappability of the sequence surrounding genes.

Package details

AuthorRyan P. Welch [aut, cph], Chee Lee [aut], Raymond G. Cavalcante [aut, cre], Chris Lee [aut], Laura J. Scott [ths], Maureen A. Sartor [ths]
Bioconductor views ChIPSeq Epigenetics FunctionalGenomics GeneSetEnrichment HistoneModification Regression
MaintainerRaymond G. Cavalcante <[email protected]>
LicenseGPL-3
Version2.2.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("chipenrich")

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chipenrich documentation built on Nov. 17, 2017, 12:23 p.m.