chipenrich: Gene Set Enrichment For ChIP-seq Peak Data

ChIP-Enrich and Poly-Enrich perform gene set enrichment testing using peaks called from a ChIP-seq experiment. The method empirically corrects for confounding factors such as the length of genes, and the mappability of the sequence surrounding genes.

Package details

AuthorRyan P. Welch [aut, cph], Chee Lee [aut], Raymond G. Cavalcante [aut, cre], Chris Lee [aut], Laura J. Scott [ths], Maureen A. Sartor [ths]
Bioconductor views ChIPSeq Epigenetics FunctionalGenomics GeneSetEnrichment HistoneModification ImmunoOncology Regression
MaintainerRaymond G. Cavalcante <>
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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chipenrich documentation built on Nov. 8, 2020, 8:11 p.m.