chipenrich: Gene Set Enrichment For ChIP-seq Peak Data
Version 2.0.1

ChIP-Enrich performs gene set enrichment testing using peaks called from a ChIP-seq experiment. The method empirically corrects for confounding factors such as the length of genes, and the mappability of the sequence surrounding genes.

Package details

AuthorRyan P. Welch [aut, cph], Chee Lee [aut], Raymond G. Cavalcante [aut, cre], Chris Lee [aut], Laura J. Scott [ths], Maureen A. Sartor [ths]
Bioconductor views ChIPSeq Epigenetics FunctionalGenomics GeneSetEnrichment HistoneModification Regression
MaintainerRaymond G. Cavalcante <[email protected]>
LicenseGPL-3
Version2.0.1
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("chipenrich")

Try the chipenrich package in your browser

Any scripts or data that you put into this service are public.

chipenrich documentation built on May 31, 2017, 11:30 a.m.