kkrismer/idr2d: Irreproducible Discovery Rate for Genomic Interactions Data
A tool to measure reproducibility between genomic experiments that produce two-dimensional peaks (interactions between peaks), such as ChIA-PET, HiChIP, and HiC. idr2d is an extension of the original idr package, which is intended for (one-dimensional) ChIP-seq peaks.
Getting started
Browse package contents
Package details |
|
|---|---|
| Bioconductor views | Classification DNA3DStructure Epigenetics FunctionalGenomics GeneRegulation HiC PeakDetection |
| Maintainer | |
| License | MIT + file LICENSE |
| Version | 1.17.0 |
| URL | https://idr2d.mit.edu |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
|
