chipseq: Example Genomic Peak Data Set

In kkrismer/idr2d: Irreproducible Discovery Rate for Genomic Interactions Data

Example Genomic Peak Data Set

Description

This object contains genomic peaks from two replicate ChIP-seq experiments.

Usage

chipseq

Format

A list with two components, the data frames rep1_df and rep2_df, which have the following four columns:

column 1:	chr	character; genomic location of peak - chromosome (e.g., "chr3")
column 2:	start	integer; genomic location of peak - start coordinate
column 3:	end	integer; genomic location of peak - end coordinate
column 4:	value	numeric; heuristic used to rank the peaks

kkrismer/idr2d documentation built on Feb. 7, 2024, 2:23 p.m.