chromswitch: An R package to detect chromatin state switches from epigenomic data

Chromswitch implements a flexible method to detect chromatin state switches between samples in two biological conditions in a specific genomic region of interest given peaks or chromatin state calls from ChIP-seq data.

Package details

AuthorSelin Jessa [aut, cre], Claudia L. Kleinman [aut]
Bioconductor views Clustering DifferentialPeakCalling Epigenetics FunctionalGenomics GeneExpression HistoneModification ImmunoOncology MultipleComparison Transcription
MaintainerSelin Jessa <>
LicenseMIT + file LICENSE
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


Try the chromswitch package in your browser

Any scripts or data that you put into this service are public.

chromswitch documentation built on Nov. 8, 2020, 5:24 p.m.