chromswitch: An R package to detect chromatin state switches from epigenomic data

Chromswitch implements a flexible method to detect chromatin state switches between samples in two biological conditions in a specific genomic region of interest given peaks or chromatin state calls from ChIP-seq data.

Package details

AuthorSelin Jessa [aut, cre], Claudia L. Kleinman [aut]
Bioconductor views Clustering DifferentialPeakCalling Epigenetics FunctionalGenomics GeneExpression HistoneModification ImmunoOncology MultipleComparison Transcription
MaintainerSelin Jessa <[email protected]>
LicenseMIT + file LICENSE
Package repositoryView on Bioconductor
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chromswitch documentation built on Oct. 31, 2019, 5:02 p.m.