pmoulos/metaseqR2-local: An R package for the analysis and result reporting of RNA-Seq data by combining multiple statistical algorithms

Provides an interface to several normalization and statistical testing packages for RNA-Seq gene expression data. Additionally, it creates several diagnostic plots, performs meta-analysis by combinining the results of several statistical tests and reports the results in an interactive way.

Getting started

Package details

Bioconductor views ATACSeq AlternativeSplicing BatchEffect Bayesian BiomedicalInformatics CellBiology ChIPSeq Clustering DataImport DifferentialExpression DifferentialSplicing Epigenetics FunctionalGenomics GeneExpression GeneSetEnrichment ImmunoOncology MultipleComparison Normalization Preprocessing ProprietaryPlatforms QualityControl RNASeq Regression ReportWriting Sequencing Software SystemsBiology TimeCourse Transcription Transcriptomics WorkflowStep
LicenseGPL (>= 3)
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
pmoulos/metaseqR2-local documentation built on Nov. 26, 2020, 7:09 a.m.