Biocview "ProprietaryPlatforms"

HenrikBengtsson/affxparser

Affymetrix File Parsing SDK

affxparser

Affymetrix File Parsing SDK

altcdfenvs

alternative CDF environments (aka probeset mappings)

aroma.affymetrix

Analysis of Large Affymetrix Microarray Data Sets

HenrikBengtsson/aroma.affymetrix

Analysis of Large Affymetrix Microarray Data Sets

pmoulos/metaseqR2-local

An R package for the analysis and result reporting of RNA-Seq data by combining multiple statistical algorithms

pmoulos/metaseqR2

An R package for the analysis and result reporting of RNA-Seq data by combining multiple statistical algorithms

metaseqR2

An R package for the analysis and result reporting of RNA-Seq data by combining multiple statistical algorithms

Nanostring-Biostats/NanoStringExperiment

Base NanoString Experiment Class

broadinstitute/CommunityAMARETTO

CommunityAMARETTO: A Computational Tool for the Discovery of Shared and Distinct Regulatory Mechanisms Across Biological Systems

HenrikBengtsson/aroma.cn

Copy-Number Analysis of Large Microarray Data Sets

aroma.cn

Copy-Number Analysis of Large Microarray Data Sets

readat

Functionality to Read and Manipulate SomaLogic ADAT files

graumannlab/readat

Functionality to Read and Manipulate SomaLogic ADAT files

harrisgm/GCSscore

GCSscore: an R package for microarray analysis for Affymetrix/Thermo Fisher arrays

GCSscore

GCSscore: an R package for microarray analysis for Affymetrix/Thermo Fisher arrays

affylmGUI

GUI for limma Package with Affymetrix Microarrays

HenrikBengtsson/aroma.seq

High-Throughput Sequence Analysis using the Aroma Framework

broadinstitute/ImagingAMARETTO

ImagingAMARETTO: tools for interpreting multi-omics networks for relevance to clinical outcomes and radiographic and histopathology imaging-derived biomarkers

limma

Linear Models for Microarray Data

hdeberg/limma

Linear Models for Microarray Data

fboulnois/made

Microarray Analysis of Differential Expression

Nanostring-Biostats/GeomxTools

NanoString GeoMx Tools

Nanostring-Biostats/NanoStringNCTools

NanoString nCounter Tools

HenrikBengtsson/illuminaio

Parsing Illumina Microarray Output Files

illuminaio

Parsing Illumina Microarray Output Files

AMARETTO

Regulatory Network Inference and Driver Gene Evaluation using Integrative Multi-Omics Analysis and Penalized Regression

broadinstitute/PerturbationAMARETTO

Regulatory Network Inference and Driver Gene Evaluation using Integrative Multi-Omics Analysis and Penalized Regression

gevaertlab/AMARETTO

Regulatory Network Inference and Driver Gene Evaluation using Integrative Multi-Omics Analysis and Penalized Regression

Nanostring-Biostats/SpatialOmicsOverlay

Spatial Overlay for Omic Data from Nanostring GeoMx Data

mfmiles/Sscore2

Sscore2: an R package for microarray analysis for Affymetrix/Thermo Fisher arrays