illuminaio: Parsing Illumina Microarray Output Files
Version 0.18.0

Tools for parsing Illumina's microarray output files, including IDAT.

AuthorKeith Baggerly [aut], Henrik Bengtsson [aut], Kasper Daniel Hansen [aut, cre], Matt Ritchie [aut], Mike L. Smith [aut], Tim Triche Jr. [ctb]
Bioconductor views DataImport Infrastructure Microarray ProprietaryPlatforms
Date of publicationNone
MaintainerKasper Daniel Hansen <kasperdanielhansen@gmail.com>
LicenseGPL-2
Version0.18.0
URL https://github.com/HenrikBengtsson/illuminaio
Package repositoryView on Bioconductor
InstallationInstall the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("illuminaio")

Popular man pages

readBGX: Low-level function to read BGX files
readBPM: Low-level function to read BPM files
readIDAT: Low-level function to read IDAT files
See all...

All man pages Function index File listing

Man pages

readBGX: Low-level function to read BGX files
readBPM: Low-level function to read BPM files
readIDAT: Low-level function to read IDAT files

Functions

Files

DESCRIPTION
NAMESPACE
NEWS
R
R/readBGX.R
R/readBPM.R
R/readIDAT.R
R/readIDAT_enc.R
R/readIDAT_nonenc.R
R/zzz.R
build
build/vignette.rds
inst
inst/CITATION
inst/doc
inst/doc/EncryptedFormat.Rnw
inst/doc/EncryptedFormat.pdf
inst/doc/illuminaio.R
inst/doc/illuminaio.Rnw
inst/doc/illuminaio.pdf
inst/unitTests
man
man/readBGX.Rd
man/readBPM.Rd
man/readIDAT.Rd
src
src/des.c
src/des.h
src/local_des.c
tests
tests/readBPM.R
tests/readIDAT_370k.R
tests/readIDAT_370k_gz.R
tests/readIDAT_450k.R
tests/readIDAT_450k_gz.R
tests/readIDAT_gs_wg6v2.R
tests/readIDAT_ht12v4.R
tests/readIDAT_wg6v2.R
vignettes
vignettes/EncryptedFormat.Rnw
vignettes/illuminaio.Rnw
vignettes/illuminaio.bib
illuminaio documentation built on May 20, 2017, 9:21 p.m.

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