illuminaio: Parsing Illumina Microarray Output Files

Tools for parsing Illumina's microarray output files, including IDAT.

Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("illuminaio")
AuthorKeith Baggerly [aut], Henrik Bengtsson [aut], Kasper Daniel Hansen [aut, cre], Matt Ritchie [aut], Mike L. Smith [aut], Tim Triche Jr. [ctb]
Bioconductor views DataImport Infrastructure Microarray ProprietaryPlatforms
Date of publicationNone
MaintainerKasper Daniel Hansen <kasperdanielhansen@gmail.com>
LicenseGPL-2
Version0.16.0
https://github.com/HenrikBengtsson/illuminaio

View on Bioconductor

Files

DESCRIPTION
NAMESPACE
NEWS
R
R/readBGX.R R/readBPM.R R/readIDAT.R R/readIDAT_enc.R R/readIDAT_nonenc.R R/zzz.R
build
build/vignette.rds
inst
inst/CITATION
inst/doc
inst/doc/EncryptedFormat.Rnw
inst/doc/EncryptedFormat.pdf
inst/doc/illuminaio.R
inst/doc/illuminaio.Rnw
inst/doc/illuminaio.pdf
inst/unitTests
man
man/readBGX.Rd man/readBPM.Rd man/readIDAT.Rd
src
src/des.c
src/des.h
src/local_des.c
tests
tests/readBPM.R tests/readIDAT_370k.R tests/readIDAT_370k_gz.R tests/readIDAT_450k.R tests/readIDAT_450k_gz.R tests/readIDAT_gs_wg6v2.R tests/readIDAT_ht12v4.R tests/readIDAT_wg6v2.R
vignettes
vignettes/EncryptedFormat.Rnw
vignettes/illuminaio.Rnw
vignettes/illuminaio.bib

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