aroma.affymetrix: Analysis of Large Affymetrix Microarray Data Sets

A cross-platform R framework that facilitates processing of any number of Affymetrix microarray samples regardless of computer system. The only parameter that limits the number of chips that can be processed is the amount of available disk space. The Aroma Framework has successfully been used in studies to process tens of thousands of arrays. This package has actively been used since 2006.

Package details

AuthorHenrik Bengtsson [aut, cre, cph], James Bullard [ctb], Kasper Hansen [ctb], Pierre Neuvial [ctb], Elizabeth Purdom [ctb], Mark Robinson [ctb], Ken Simpson [ctb]
Bioconductor views CopyNumberVariants DataImport DataRepresentation DifferentialExpression ExonArray GUI GeneExpression Infrastructure Microarray OneChannel Preprocessing ProprietaryPlatforms QualityControl ReportWriting SNP Transcription Visualization aCGH
MaintainerHenrik Bengtsson <>
LicenseLGPL (>= 2.1)
Package repositoryView on CRAN
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aroma.affymetrix documentation built on July 18, 2022, 5:07 p.m.