Biocview "ATACSeq"

A/B compartment inference from ATAC-seq and methylation array data
A/B compartment inference from ATAC-seq and methylation array data
A/B compartment inference from ATAC-seq and methylation array data
A dimensionality reduction tool using gene detection pattern to mitigate noisy expression profile of scRNA-seq
A dimensionality reduction tool using gene detection pattern to mitigate noisy expression profile of scRNA-seq
A dimensionality reduction tool using gene detection pattern to mitigate noisy expression profile of scRNA-seq
AnaLysis routines for ePigenomicS data
AnaLysis routines for ePigenomicS data
An Easy-to-use Systematic pipeline for ATACseq data analysis
An Easy-to-use Systematic pipeline for ATACseq data analysis
An Easy-to-use Systematic pipeline for ATACseq data analysis
An Easy-to-use Systematic pipeline for ATACseq data analysis
An Easy-to-use Systematic pipeline for ATACseq data analysis
An R package for the analysis and result reporting of RNA-Seq data by combining multiple statistical algorithms
An R package for the analysis and result reporting of RNA-Seq data by combining multiple statistical algorithms
An R package for the analysis and result reporting of RNA-Seq data by combining multiple statistical algorithms
An R package for the creation of complex genomic profile plots
ATAC-seq Quality Control
ATAC-seq Quality Control
Bias-free Footprint Enrichment Test
Bias-free Footprint Enrichment Test
Combinatorial and Differential Chromatin State Analysis for ChIP-Seq Data
Combinatorial and Differential Chromatin State Analysis for ChIP-Seq Data
Coordinate Covariation Analysis
Coordinate Covariation Analysis
Coordinate Covariation Analysis
Differential Epigenetic Coregulation Test
Fast Sequence Mapping in High-Throughput shRNA and CRISPR Screens
Mixture Nested Effects Models
Mixture Nested Effects Models
pinnacle: Gene set enrichment analysis based on genomic intervals
Precict cis-co-accessibility from single-cell chromatin accessibility data
Precict cis-co-accessibility from single-cell chromatin accessibility data
Precict cis-co-accessibility from single-cell chromatin accessibility data
Replicate oriented Visualization of a genomic region
Replicate oriented Visualization of a genomic region
Replicate oriented Visualization of a genomic region
Set of tools to analyze ATAC-seq data
Tools for the Efficient Analysis of High-Resolution Genomics Data
Tools for the Efficient Analysis of High-Resolution Genomics Data
Unbiased Extraction of Single Cell Identity using Multiple Correspondence Analysis
Unbiased Extraction of Single Cell Identity using Multiple Correspondence Analysis
Utilities for ATACseq QC, differential accessibility, and integration