Biocview "WorkflowStep"

A fluent interface for manipulating GenomicRanges
A fluent interface for manipulating GenomicRanges
An integrated analysis package of Gene expression and Copy number alteration
An integrated analysis package of Gene expression and Copy number alteration
An integrated analysis package of miRNA and mRNA expression data
An integrated analysis package of miRNA and mRNA expression data
An integrated analysis package of miRNA and mRNA expression data
An R package for the analysis and result reporting of RNA-Seq data by combining multiple statistical algorithms.
An R package for the analysis and result reporting of RNA-Seq data by combining multiple statistical algorithms.
An R package for the analysis and result reporting of RNA-Seq data by combining multiple statistical algorithms.
An R package for the analysis and result reporting of RNA-Seq data by combining multiple statistical algorithms.
An R package for the analysis and result reporting of RNA-Seq data by combining multiple statistical algorithms.
ascend - Analysis of Single Cell Expression, Normalisation, and Differential expression
AUCell: Analysis of 'gene set' activity in single-cell RNA-seq data (e.g. identify cells with specific gene signatures)
AUCell: Analysis of 'gene set' activity in single-cell RNA-seq data (e.g. identify cells with specific gene signatures)
ChIPanalyser: Predicting Transcription Factor Binding Sites
ChIPanalyser: Predicting Transcription Factor Binding Sites
Compensates for the bias introduced by median normalization in phosphoproteomics
Compensates for the bias introduced by median normalization in phosphoproteomics
Differential transcript usage and tuQTL analyses with Dirichlet-multinomial model in RNA-seq
Differential transcript usage and tuQTL analyses with Dirichlet-multinomial model in RNA-seq
Differential transcript usage and tuQTL analyses with Dirichlet-multinomial model in RNA-seq
Exposome and omic data associatin and integration analysis
Exposome and omic data associatin and integration analysis
Feature Specific Quantile Normalization
Gene-level RNA-seq differential expression and pathway analysis using Rsubread and the edgeR quasi-likelihood pipeline
Gene Set Enrichment Analysis Extended to Contingency Cubes
Gene Set Enrichment Analysis Extended to Contingency Cubes
GUIDE-seq analysis pipeline
GUIDE-seq analysis pipeline
GUIDE-seq analysis pipeline
Imports a tRNAscan-SE result file as GRanges object
Imports a tRNAscan-SE result file as GRanges object
Imports a tRNAscan-SE result file as GRanges object
Maximum Likelihood Decay Modeling of RNA Degradation Data
Maximum Likelihood Decay Modeling of RNA Degradation Data
Network-based prioritization of putative metabolite IDs
Network-based prioritization of putative metabolite IDs
Non-detects in qPCR data
Non-detects in qPCR data
Non-detects in qPCR data
Non-detects in qPCR data
PGCA: An Algorithm to Link Protein Groups Created from MS/MS Data
PGCA: An Algorithm to Link Protein Groups Created from MS/MS Data
PGCA: An Algorithm to Link Protein Groups Created from MS/MS Data
R utilities for rabix.
R Wrapper for DGIdb
R Wrapper for DGIdb
R Wrapper for DGIdb
Single Cell RNA-Seq UMI Filtering Facilitator (scruff)
Single Cell RNA-Seq UMI Filtering Facilitator (scruff)
Single Cell RNA-Seq UMI Filtering Facilitator (scruff)
Single Cell RNA-Seq UMI Filtering Facilitator (scruff)
TCGA utility functions for data management
TCGA utility functions for data management
TCGA utility functions for data management
TCGA utility functions for data management