systemPipeRdata is a helper package to generate with a single command NGS workflow templates that are intended to be used by its parent package systemPipeR. The latter is an environment for building end-to-end analysis pipelines with automated report generation for next generation sequence (NGS) applications such as RNA-Seq, RIBO-Seq, ChIP-Seq, VAR-Seq and many others. Detailed examples for using systemPipeRdata are given in systemPipeR's overview vignette.
|Bioconductor views||Alignment ChIPSeq Coverage DataImport GeneExpression GeneSetEnrichment Genetics Infrastructure MethylSeq QualityControl RNASeq SNP Sequencing|
|Maintainer||Thomas Girke <[email protected]>|
|Package repository||View on GitHub|
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