spo111/DynaMO: DynaMO predicts spatiotemporal binding of transcription factors

DynaMO predicts transcription factor (TF) binding sites by learning the spatial distribution of epigenomic data with a random forest model. In a time-course experiment, DynaMO also predicts the temporal binding patterns of TFs at predicted binding sites. DynaMO identifies important TFs in a dynamic process.

Getting started

Package details

AuthorZheng Kuang, Hongkai Ji
Bioconductor views ChIPSeq Epigenetics GeneRegulation Transcription
MaintainerZheng Kuang <kuangzheng04@gmail.com>
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
spo111/DynaMO documentation built on May 30, 2019, 7:59 a.m.