spo111/DynaMO: DynaMO predicts spatiotemporal binding of transcription factors

DynaMO predicts transcription factor (TF) binding sites by learning the spatial distribution of epigenomic data with a random forest model. In a time-course experiment, DynaMO also predicts the temporal binding patterns of TFs at predicted binding sites. DynaMO identifies important TFs in a dynamic process.

Getting started

Package details

AuthorZheng Kuang, Hongkai Ji
Bioconductor views ChIPSeq Epigenetics GeneRegulation Transcription
MaintainerZheng Kuang <[email protected]>
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
spo111/DynaMO documentation built on Aug. 24, 2017, 7:02 a.m.