Maximum likelihood estimates (MLE) of the proportions of 5-mC and 5-hmC in the DNA using information from BS-conversion, TAB-conversion, and oxBS-conversion methods. One can use information from all three methods or any combination of two of them. Estimates are based on Binomial model by Qu et al. (2013) <doi:10.1093/bioinformatics/btt459> and Kiihl et al. (2018, to appear).
|Author||Samara Kiihl [aut, cre], Maria Jose Martinez-Garrido [aut], Arce Domingo-Relloso [aut], Jose Bermudez [aut], Maria Tellez-Plaza [aut]|
|Bioconductor views||DNAMethylation Epigenetics MethylationArray Microarray OneChannel Software TwoChannel|
|Maintainer||Samara Kiihl <[email protected]>|
|License||MIT + file LICENSE|
|Package repository||View on CRAN|
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