TOAST: Tools for the analysis of heterogeneous tissues

This package is devoted to analyzing high-throughput data (e.g. gene expression microarray, DNA methylation microarray, RNA-seq) from complex tissues. Current functionalities include 1. detect cell-type specific or cross-cell type differential signals 2. improve variable selection in reference-free deconvolution 3. partial reference-free deconvolution with prior knowledge.

Package details

AuthorZiyi Li and Hao Wu
Bioconductor views DNAMethylation DifferentialExpression DifferentialMethylation Epigenetics GeneExpression GeneTarget MethylationArray Microarray
MaintainerZiyi Li <>
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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TOAST documentation built on Nov. 8, 2020, 5:55 p.m.