jordimartorell/mCSEA: Methylated CpGs Set Enrichment Analysis

Identification of diferentially methylated regions (DMRs) in predefined regions (promoters, CpG islands...) from the human genome using Illumina's 450K or EPIC microarray data. Provides methods to rank CpG probes based on linear models and includes plotting functions.

Getting started

Package details

AuthorJordi Martorell-Marugán and Pedro Carmona-Sáez
Bioconductor views DNAMethylation DifferentialMethylation Epigenetics Genetics GenomeAnnotation ImmunoOncology MethylationArray Microarray MultipleComparison TwoChannel
MaintainerJordi Martorell-Marugán <[email protected]>
LicenseGPL-2
Version1.5.3
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("jordimartorell/mCSEA")
jordimartorell/mCSEA documentation built on Aug. 21, 2019, 3:49 p.m.