CNVtools: A package to test genetic association with CNV data

This package is meant to facilitate the testing of Copy Number Variant data for genetic association, typically in case-control studies.

Install the latest version of this package by entering the following in R:
AuthorChris Barnes <> and Vincent Plagnol <>
Bioconductor views GeneticVariability
Date of publicationNone
MaintainerChris Barnes <>

View on Bioconductor


A112 Man page
apply.ldf Man page
apply.pca Man page
CNV.fitModel Man page
cnv.plot Man page
CNVtest.binary Man page
CNVtest.binary.T Man page
CNVtest.qt Man page
CNVtest.qt.T Man page Man page
CNVtools Man page
CNVtools-package Man page Man page
EM.starting.point Man page
ExpandData Man page
get.model.spec Man page
getparams Man page
getQualityScore Man page
qt.plot Man page
test.posterior Man page

Questions? Problems? Suggestions? or email at

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.