compact.data.frame: Compacts the expanded data frame format needed by our fitting...

Description Usage Arguments Details Value Author(s)

View source: R/compact.data.frame.R

Description

Small internal routine returning a more compact and user friendly version of the output of the fitting algorithm.

Usage

1
compact.data.frame(full.frame)

Arguments

full.frame

An expanded data frame (one point per data point and per component in the fit, ie. 1,000 individuals fitted on three components would have 3,000 rows.

Details

This function should be invisible to most users and is part of the EM fitting procedure.

Value

A data frame in a compact version, with one row per data point and one column for each component: P1, P2, P3 in the three component case for the probabilities for the calls to be equal to 1,2 or 3.

Author(s)

Vincent Plagnol [email protected] and Chris Barnes [email protected]


CNVtools documentation built on Nov. 1, 2018, 2:24 a.m.