SNPchip: Visualizations for copy number alterations

Functions for plotting SNP array data; maintained for historical reasons

AuthorRobert Scharpf <rscharpf@jhu.edu> and Ingo Ruczinski
Date of publicationNone
MaintainerRobert Scharpf <rscharpf@jhu.edu>
LicenseLGPL (>= 2)
Version2.20.0
http://www.biostat.jhsph.edu/~iruczins/software/snpchip.html

View on Bioconductor

Files

SNPchip/DESCRIPTION
SNPchip/NAMESPACE
SNPchip/R
SNPchip/R/AllGenerics.R SNPchip/R/annotation-functions.R SNPchip/R/coerce-methods.R SNPchip/R/grid-functions.R SNPchip/R/idiogram-functions.R SNPchip/R/panel-functions.R SNPchip/R/xyplot-methods.R SNPchip/R/zzz.R
SNPchip/build
SNPchip/build/vignette.rds
SNPchip/changelog
SNPchip/inst
SNPchip/inst/CITATION
SNPchip/inst/doc
SNPchip/inst/doc/PlottingIdiograms.R
SNPchip/inst/doc/PlottingIdiograms.Rnw
SNPchip/inst/doc/PlottingIdiograms.pdf
SNPchip/inst/extdata
SNPchip/inst/extdata/cytoBand_hg18.txt
SNPchip/inst/extdata/cytoBand_hg19.txt
SNPchip/inst/extdata/gap_hg18.rda
SNPchip/inst/extdata/gap_hg19.rda
SNPchip/inst/hg18
SNPchip/inst/unitTests
SNPchip/inst/unitTests/Makefile
SNPchip/inst/unitTests/test_xyplot.R
SNPchip/man
SNPchip/man/arrangeFigs.Rd SNPchip/man/arrangeSideBySide.Rd SNPchip/man/centromere.Rd SNPchip/man/dataFrame-methods.Rd SNPchip/man/dataFrame.Rd SNPchip/man/defunct.Rd
SNPchip/man/getCytoband.rd
SNPchip/man/latticeFigs.Rd SNPchip/man/plotIdiogram.Rd SNPchip/man/xypanel.Rd SNPchip/man/xypanelBaf.Rd SNPchip/man/xyplot.Rd SNPchip/man/xyplotLrrBaf.Rd
SNPchip/tests
SNPchip/tests/doRUnit.R
SNPchip/vignettes
SNPchip/vignettes/PlottingIdiograms.Rnw
SNPchip/vignettes/refs.bib

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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All documentation is copyright its authors; we didn't write any of that.