dataFrame: Generic function for coercing gSet objects to data.frame

In SNPchip: Visualizations for copy number alterations

Description

Generic function for coercing gSet objects to data.frame as a precursor to plotting with lattice

Usage

dataFrame(range, data, ...)

Arguments

range	A GenomicRanges object containing interval(s) for which low-level data should be plotted
data	A container for the low-level data (e.g., BafLrrSet) or a RangedSummarizedExperiment
...	Additional arguments passed to findOverlaps. E.g., argument maxgap can be used to select the size of the window surrounding the genomic intervals in range for plotting.

Value

A data.frame with column labels that depend on the class of data.

Author(s)

R. Scharpf

SNPchip documentation built on Oct. 31, 2019, 2:07 a.m.