Clomial: Infers clonal composition of a tumor

Clomial fits binomial distributions to counts obtained from Next Gen Sequencing data of multiple samples of the same tumor. The trained parameters can be interpreted to infer the clonal structure of the tumor.

Package overview A likelihood maximization approach to infer the clonal structure of a cancer using multiple tumor samples

Vignettes Man pages API and functions Files

Package details
Author	Habil Zare and Alex Hu
Bioconductor views	Bayesian Clustering DNASeq ExomeSeq GeneticVariability Genetics ImmunoOncology MultipleComparison Sequencing TargetedResequencing
Maintainer	Habil Zare <zare@u.washington.edu>
License	GPL (>= 2)
Version	1.26.0
Package repository	View on Bioconductor
Installation	Install the latest version of this package by entering the following in R: `if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("Clomial")`