CAnD: Perform Chromosomal Ancestry Differences (CAnD) Analyses

Functions to perform the CAnD test on a set of ancestry proportions. For a particular ancestral subpopulation, a user will supply the estimated ancestry proportion for each sample, and each chromosome or chromosomal segment of interest. A p-value for each chromosome as well as an overall CAnD p-value will be returned for each test. Plotting functions are also available.

Package details

AuthorCaitlin McHugh, Timothy Thornton
Bioconductor views GeneticVariability Genetics SNP StatisticalMethod
MaintainerCaitlin McHugh <[email protected]>
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:

Try the CAnD package in your browser

Any scripts or data that you put into this service are public.

CAnD documentation built on Nov. 1, 2018, 5:05 a.m.