GeneGeneInteR: Tools for Testing Gene-Gene Interaction at the Gene Level

The aim of this package is to propose several methods for testing gene-gene interaction in case-control association studies. Such a test can be done by aggregating SNP-SNP interaction tests performed at the SNP level (SSI) or by using gene-gene multidimensionnal methods (GGI) methods. The package also proposes tools for a graphic display of the results.

Package details

AuthorMathieu Emily, Nicolas Sounac, Florian Kroell, Magalie Houee-Bigot
Bioconductor views GeneticVariability Genetics GenomeWideAssociation SNP
MaintainerMathieu Emily <[email protected]>, Magalie Houee-Bigot <[email protected]>
LicenseGPL (>= 2)
Package repositoryView on Bioconductor
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GeneGeneInteR documentation built on Nov. 1, 2018, 2:22 a.m.