derele/MultiAmplicon: Metabarcoding and microbiome analysis using multiple amplicons

This package allows to run a typical R/bioconductor (i.e. dada2) workflow on multiple amplicons defined by different primer pairs (e.g. on the 16S or 18S genes and COI).

Getting started

Package details

Bioconductor views Classification Clustering GeneticVariability Genetics Metagenomics Microbiome MultipleComparison Sequencing
Maintainer
LicenseGPL-3
Version0.0.0.9000
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("derele/MultiAmplicon")
derele/MultiAmplicon documentation built on April 15, 2019, 7:53 p.m.