Biocview "Microbiome"

Accurate, high-resolution sample inference from amplicon sequencing data
Accurate, high-resolution sample inference from amplicon sequencing data
Accurate, high-resolution sample inference from amplicon sequencing data
A metagenomic pipeline for systems biology
A metagenomic pipeline for systems biology
Analysis Of Differential Abundance Taking Sample Variation Into Account
Analysis Of Differential Abundance Taking Sample Variation Into Account
An interface package for the BIOM file format
An interface package for the BIOM file format
An interface package for the BIOM file format
An interface package for the BIOM file format
Compare Characteristic Features of Count Data Sets
Dirichlet-Multinomial Mixture Model Machine Learning for Microbiome Data
Dirichlet-Multinomial Mixture Model Machine Learning for Microbiome Data
Exploration of marker-gene sequence taxonomic annotations
Exploration of marker-gene sequence taxonomic annotations
Exploration of marker-gene sequence taxonomic annotations
Greengenes 13.5 16S rRNA Database Annotation Data
Greengenes 13.8 85% similarity OTU threshold 16S rRNA Database Annotation Data
Greengenes 13.8 88% similarity OTU threshold 16S rRNA Database Annotation Data
Greengenes 13.8 91% similarity OTU threshold 16S rRNA Database Annotation Data
Greengenes 13.8 94% similarity OTU threshold 16S rRNA Database Annotation Data
Greengenes 13.8 97% similarity OTU threshold 16S rRNA Database Annotation Data
Handling and analysis of high-throughput microbiome census data
Handling and analysis of high-throughput microbiome census data
Handling and analysis of high-throughput microbiome census data
Identify Contaminants in Marker-gene and Metagenomics Sequencing Data
Interface to the RDP Classifier
Interface to the RDP Classifier
Mapping of Phyloseq Information
Microbiome Analytics
PathoStat Statistical Microbiome Analysis Package
PathoStat Statistical Microbiome Analysis Package
PathoStat Statistical Microbiome Analysis Package
Phylogenetic partitioning based ILR transform for metagenomics data
Phylogenetic partitioning based ILR transform for metagenomics data
Phylogenetic partitioning based ILR transform for metagenomics data
Run metabarcoding alalyses for multiple amplicons
Sparse Data Observations for Simulating Synthetic Abundance
Sparse Data Observations for Simulating Synthetic Abundance
Sparse Data Observations for Simulating Synthetic Abundance
Statistical analysis for sparse high-throughput sequencing
Statistical analysis for sparse high-throughput sequencing
Statistical analysis for sparse high-throughput sequencing
Tools for curating, analyzing, and manipulating biological sequences
Tools for curating, analyzing, and manipulating biological sequences
Tools for microbiome analysis