combi: Compositional omics model based visual integration

Combine quasi-likelihood estimation, compositional regression models and latent variable models for integrative visualization of several omics datasets. Both unconstrained and constrained integration is available, the results are shown as interpretable multiplots.

Getting started

Package details

AuthorStijn Hawinkel <stijn.hawinkel@ugent.be>
Bioconductor views DimensionReduction Metabolomics Metagenomics Microbiome Visualization
MaintainerJoris Meys <joris.meys@ugent.be>
LicenseGPL-2
Version1.2.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("combi")

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combi documentation built on Nov. 8, 2020, 5:34 p.m.