estOff: Estimate the row/column parameters of the independence model

In combi: Compositional omics model based visual integration

Description

Estimate the row/column parameters of the independence model

Usage

estOff(data, distribution, rowOff, colOff, meanVarTrend, col,
  newtonRaphson, libSizes, ...)

Arguments

data	a list of data matrices with the same number of samples n in the rows. Also phyloseq objects are acceptable
distribution	a character string describing which distributional assumption should be used.
rowOff, colOff	current row and column offset estimates
meanVarTrend	The estimated mean-variance trend
col	A logical, should column offsets be estimated
newtonRaphson	A boolean, should Newton-Raphson be used to solve the estimating equations
libSizes	The library sizes, used to evaluate the mean-variance trend
...	passed onto nleqslv

Value

The estimated marginal parameters

combi documentation built on Nov. 8, 2020, 5:34 p.m.