extractMat: A function to extract a data matrix from a number of objects

Description Usage Arguments Value

Description

A function to extract a data matrix from a number of objects

Usage

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extractMat(Y, ...)

## S4 method for signature 'ExpressionSet'
extractMat(Y, logTransformGaussian, ...)

## S4 method for signature 'SummarizedExperiment'
extractMat(Y, ...)

## S4 method for signature 'matrix'
extractMat(Y, ...)

Arguments

Y

a phyloseq or eSet object, or another object, or a raw data matrix

...

additional arguments for the extractor function

logTransformGaussian

A boolean, should array data be logtransformed

Value

A data matrix with samples in the rows and features in the columns


combi documentation built on Nov. 8, 2020, 5:34 p.m.

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