checkMeanVarTrend: Quickly check if the mean variance trend provides a good fit

In combi: Compositional omics model based visual integration

Description

Quickly check if the mean variance trend provides a good fit

Usage

checkMeanVarTrend(data, meanVarFit = "spline", returnTrend = FALSE,
  ...)

Arguments

data	Data in any acceptable format (see details ?combi)
meanVarFit	The type of mean variance fit, either "cubic" or "spline"
returnTrend	A boolean, should the estimated trend be returned (TRUE) or only plotted (FALSE)?
...	passed on to the estMeanVarTrend() function

Value

A plot object

Examples

data(Zhang)
par(mfrow = c(1,2))
lapply(list("microbiome" = zhangMicrobio, "metabolome" = zhangMetabo),
 checkMeanVarTrend)
 par(mfrow = c(1,1))

combi documentation built on Nov. 8, 2020, 5:34 p.m.