getCounts: getCounts
In derele/MultiAmplicon: Metabarcoding and microbiome analysis using multiple amplicons
View source: R/pipeline_track.R
getCounts R Documentation
getCounts
Description
Get a sum of uniques from an input object.
Usage
getCounts(MaMat, what = "input")
Arguments
MaMat
A matrix or vector of derep, dada or merger objects
Details
This function calculates the number of unique sequences, ASVs or
merged sequences from the relevant slot in a MultiAmplicon object
Value
a matrix, list or vector of counts, depending on the class
of the input
Author(s)
Emanuel Heitlinger
derele/MultiAmplicon documentation built on Dec. 11, 2024, 12:09 p.m.
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View source: R/pipeline_track.R
| getCounts | R Documentation |
getCounts
Description
Get a sum of uniques from an input object.
Usage
getCounts(MaMat, what = "input")
Arguments
MaMat |
A matrix or vector of derep, dada or merger objects |
Details
This function calculates the number of unique sequences, ASVs or merged sequences from the relevant slot in a MultiAmplicon object
Value
a matrix, list or vector of counts, depending on the class of the input
Author(s)
Emanuel Heitlinger
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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