toPhyloseq: toPhyloseq
In derele/MultiAmplicon: Metabarcoding and microbiome analysis using multiple amplicons
toPhyloseq R Documentation
toPhyloseq
Description
Populate a phyloseq object with the contents of a MultiAmplicon
object
Usage
toPhyloseq(MA, samples, multi2Single = TRUE, ...)
Arguments
MA
MultiAmplicon object with the taxonTable and
sequenceTableNoChime slots filled.
samples
samples to include in phyloseq object
multi2Single
should data from different amplicon be
combined into one phyloseq object (TRUE) or should a list of
seperate objects, one for each amplicon, be returned?
...
additional arguments to be passed to
phyloseq
Details
Information stored in a MultiAmplicon object is transferred
to a phyloseq object.
Value
a phyloseq object
Author(s)
Emanuel Heitlinger
derele/MultiAmplicon documentation built on Oct. 14, 2023, 7:43 p.m.
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| toPhyloseq | R Documentation |
toPhyloseq
Description
Populate a phyloseq object with the contents of a MultiAmplicon object
Usage
toPhyloseq(MA, samples, multi2Single = TRUE, ...)
Arguments
MA |
MultiAmplicon object with the |
samples |
samples to include in phyloseq object |
multi2Single |
should data from different amplicon be combined into one phyloseq object (TRUE) or should a list of seperate objects, one for each amplicon, be returned? |
... |
additional arguments to be passed to
|
Details
Information stored in a MultiAmplicon object is transferred
to a phyloseq object.
Value
a phyloseq object
Author(s)
Emanuel Heitlinger
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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