calcPropMerged: calcPropMerged

Description Usage Arguments Details Value Author(s)

Description

Calculate the proportion of merged sequences for a MultiAmplicon object.

Usage

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calcPropMerged(MA)

## S4 method for signature 'MultiAmplicon'
calcPropMerged(MA)

Arguments

MA

MultiAmplicon object with the mergers slot filled.

Details

Merging using dadaMulti can result in loss of sequences with too little overlap. This function determines what proporton of sequences were merged using mergeMulti for each amplicon in a MultiAmplicon object.

Value

a vector of proportions of merged reads for each amplicon (potentially named).

Author(s)

Emanuel Heitlinger


derele/MultiAmplicon documentation built on May 15, 2019, 5:04 a.m.