Description Usage Arguments Value Author(s)
Function for determining whether reads should be oriented to the target strand, always displayed on the positive strand, or oriented to
1 | rcAlns(target.strand, orientation)
|
target.strand |
The target strand (one of "+","-","*") |
orientation |
One of "target", "opposite" and "positive" (Default: "target") |
A logical value indicating whether reads should be reverse complemented
Helen Lindsay
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