Biocview "CRISPR"

Algorithms and data structures for large single-cell expression matrices

Analysis of pooled genetic screens

Analysis of Single-Cell CRISPR Screen Data

Automated analysis of CRISPR experiments

Cellular DNA Barcode Analysis toolkit

Design of target-specific guide RNAs in CRISPR-Cas9, genome-editing systems

Fast Sequence Mapping in High-Throughput shRNA and CRISPR Screens

GEMINI: Variational inference approach to infer genetic interactions from pairwise CRISPR screens

GUIDE-seq analysis pipeline

GUIDE-seq and PEtag-seq analysis pipeline

HTSanalyzeR2: An R package for functional annotation, network analysis and time series analysis of high-throughput data

Identify genes associated with multiple expression phenotypes in single-cell CRISPR screening data

Inferring unobserved perturbations from gene expression data

Integrative Analysis Pipeline for Pooled CRISPR Functional Genetic Screens

Lineage tracing by indels

Mean Alterations Using Discrete Expression

Mixture Nested Effects Models

Multi-locus multi-purpose Crispr/Cas design

Shiny Application for Interactive CRISPR Screen Visualization, Exploration, Comparison, and Filtering

Suite of Functions for Pooled Crispr Screen QC and Analysis

Targeted scRNA-seq primer design for TAP-seq

Tools for counting and visualising mutations in a target location