weililab/scMAGeCK: Identify genes associated with multiple expression phenotypes in single-cell CRISPR screening data

scMAGeCK is a computational model to identify genes associated with multiple expression phenotypes from CRISPR screening coupled with single-cell RNA sequencing data (CROP-seq)

Getting started

Package details

AuthorWei Li, Xiaolong Cheng, Lin Yang
Bioconductor views CRISPR GeneExpression PooledScreens RNASeq Regression SingleCell Transcriptomics
MaintainerXiaolong Cheng <xiaolongcheng1120@gmail.com>
LicenseBSD_2_clause
Version1.9.2
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("weililab/scMAGeCK")
weililab/scMAGeCK documentation built on May 2, 2022, 12:53 p.m.