MAGeCKFlute is designed to surporting downstream analysis, utilizing the gene summary data provided through MAGeCK or MAGeCK-VISPR. Quality control, normalization, and screen hit identification for CRISPR screen data are performed in pipeline. Identified hits within the pipeline are categorized based on experimental design, and are subsequently interpreted by functional enrichment analysis.
|Author||Wubing Zhang, Feizhen Wu, Binbin Wang|
|Bioconductor views||CRISPR DifferentialExpression ExperimentalDesign FunctionalGenomics FunctionalPrediction GeneExpression GeneSetEnrichment GeneTarget GeneticVariability GenomicVariation GraphAndNetwork KEGG Metabolomics Microarray MultipleComparison Normalization Pathways PooledScreens Proteomics QualityControl RNASeq Sequencing SystemsBiology Visualization|
|Maintainer||Wubing Zhang<[email protected]>|
|Package repository||View on GitHub|
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